5B7A Structural Genomics date Jun 05, 2016
title Solution Structure Of Lys37 Acetylated Human Sumo1
authors M.T.Naik, N.Naik, H.Shih, T.Huang
compound source
Molecule: Small Ubiquitin-Related Modifier 1
Chain: A
Fragment: Unp Residues 1-97
Synonym: Sumo-1,Gap-Modifying Protein 1,Gmp1,Smt3 Homolog 3 Ubiquitin-Homology Domain Protein Pic1,Ubiquitin-Like Prote Smt3c,Ubiquitin-Like Protein Ubl1;
Engineered: Yes
Other_details: Lys37 Acetylated Mature Small Ubiquitin-Rela Modifier 1 ( Sumo1) Residues 1-14 (Mgsshhhhhhsqdp) Represen Native Purification Tag. These Residues Were Neither Assign Included In Structure Calculation.
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Sumo1, Smt3c, Smt3h3, Ubl1, Oksw-Cl.43
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Pcdfduet-1
Expression_system_vector: Pcdfduet-1
Other_details: Plasmid Pcdf Pylt-1 With Sumo Insert With K3 Mutation (With Amber Codon) And Packrs-3 As Described In Ne Al., Mol Cell, 36, 153, 2009
methodSolution NMR
ligand ALY enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (507 Kb) [Save to disk]
  • Biological Unit Coordinates (5b7a.pdb1.gz) 26 Kb
  • LPC: Ligand-Protein Contacts for 5B7A
  • CSU: Contacts of Structural Units for 5B7A
  • Original NMR restraints for 5B7A from PDB
  • Retrieve 5B7A in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5B7A from S2C, [Save to disk]
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    • Visual 3D analysis of 5B7A
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5b7a_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 5B7A
  • Community annotation for 5B7A at PDBWiki (http://pdbwiki.org)

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