5BXV	Translation	date	Jun 09, 2015
title	Eif4e Complex
authors	N.Sekiyama, H.Arthanari, E.Papdopoulos, R.A.Rodriguez-Mias, G.Wa M.Leger-Abraham
compound		source
Molecule: Eukaryotic Translation Initiation Factor 4e Chain: A, C Fragment: Unp Residues 33-217 Synonym: Mrna Cap-Binding Protein,Eif-4f 25 Kda Subunit Engineered: Yes		Organism_scientific: Mus Musculus Organism_common: Mouse Organism_taxid: 10090 Gene: Eif4e Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Eukaryotic Translation Initiation Factor 4e-Bindi 1; Chain: B, D Fragment: Unp Residues 50-84 Synonym: Eif4e-Binding Protein 1,Phosphorylated Heat- And A Protein Regulated By Insulin 1,Phas-I; Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Eif4ebp1 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 1 21 1	R_factor 0.162 R_Free 0.195
crystal cell	length a length b length c angle alpha angle beta angle gamma 67.607 67.830 79.084 90.00 112.43 90.00
method	X-Ray Diffraction	resolution	2.10 Å
ligand	MGP	enzyme
Gene Ontology	Chain Function Process Component A, C D, B
Primary reference	Molecular mechanism of the dual activity of 4EGI-1: Dissociating eIF4G from eIF4E but stabilizing the binding of unphosphorylated 4E-BP1., Sekiyama N, Arthanari H, Papadopoulos E, Rodriguez-Mias RA, Wagner G, Leger-Abraham M, Proc Natl Acad Sci U S A. 2015 Jul 13. pii: 201512118. PMID:26170285

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (223 Kb) [Save to disk] Biological Unit Coordinates (5bxv.pdb1.gz) 106 Kb Biological Unit Coordinates (5bxv.pdb2.gz) 110 Kb LPC: Ligand-Protein Contacts for 5BXV CSU: Contacts of Structural Units for 5BXV Structure Factors (856 Kb) Retrieve 5BXV in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5BXV from S2C, [Save to disk] Re-refined 5bxv structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5BXV in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5BXV

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5bxv_D] [5bxv_A] [5bxv_B] [5bxv] [5bxv_C] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 5BXV

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