5D3F Signaling Protein date Aug 06, 2015
title Crystal Structure Of Human 14-3-3 Zeta In Complex With Cftr Peptide Ps753-Ps768 And Stabilizer Fusicoccin-A
authors L.M.Stevers, S.F.R.Leysen, C.Ottmann
compound source
Molecule: 14-3-3 Protein Zetadelta
Chain: A, B
Synonym: Protein Kinase C Inhibitor Protein 1,Kcip-1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ywhaz
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Cystic Fibrosis Transmembrane Conductance Regulat
Chain: C
Fragment: Unp Residues 747-774
Synonym: Cftr,Atp-Binding Cassette Sub-Family C Member 7,Ch Conductance-Controlling Atpase,Camp-Dependent Chloride Chan
Ec: 3.6.3.49
Engineered: Yes

Synthetic: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
symmetry Space Group: C 2 2 21
R_factor 0.246 R_Free 0.303
crystal
cell
length a length b length c angle alpha angle beta angle gamma
69.607 110.166 132.604 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.74 Å
ligand FSC, SEP enzyme Hydrolase E.C.3.6.3.49 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • positive regulation of prote...

  • Primary referenceCharacterization and small-molecule stabilization of the multisite tandem binding between 14-3-3 and the R domain of CFTR., Stevers LM, Lam CV, Leysen SF, Meijer FA, van Scheppingen DS, de Vries RM, Carlile GW, Milroy LG, Thomas DY, Brunsveld L, Ottmann C, Proc Natl Acad Sci U S A. 2016 Mar 1;113(9):E1152-61. doi:, 10.1073/pnas.1516631113. Epub 2016 Feb 17. PMID:26888287
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (81 Kb) [Save to disk]
  • Biological Unit Coordinates (5d3f.pdb1.gz) 75 Kb
  • LPC: Ligand-Protein Contacts for 5D3F
  • CSU: Contacts of Structural Units for 5D3F
  • Structure Factors (240 Kb)
  • Retrieve 5D3F in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5D3F from S2C, [Save to disk]
  • Re-refined 5d3f structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5D3F in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5D3F
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5d3f] [5d3f_C] [5d3f_B] [5d3f_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 5D3F: [14_3_3 ] by SMART
  • Other resources with information on 5D3F
  • Community annotation for 5D3F at PDBWiki (http://pdbwiki.org)

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