5E5R	Hydrolase Cell Adhesion	date	Oct 09, 2015
title	Crystal Structure Of The Complex Between Carbonic Anhydrase- Domain Of Ptprg And Immunoglobulin Domains 2-3 Of Cntn3
authors	R.M.Nikolaienko, S.Bouyain
compound		source
Molecule: Receptor-Type Tyrosine-Protein Phosphatase Gamma Chain: A, C Fragment: Ca Domain, Unp Residues 56-320 Synonym: R-Ptp-Gamma Ec: 3.1.3.48 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Ptprg, Ptpg Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Origami2(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet32hp
Molecule: Contactin-3 Chain: B, D Fragment: Immunoglobulin Domains 2-3, Unp Residues 124-316 Synonym: Brain-Derived Immunoglobulin Superfamily Protein 1 Plasmacytoma-Associated Neuronal Glycoprotein; Engineered: Yes		Organism_scientific: Mus Musculus Organism_common: Mouse Organism_taxid: 10090 Gene: Cntn3, Pang, Pcs Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: T7 Shuffle Express Expression_system_vector_type: Plasmid Expression_system_plasmid: Pt7hmp
symmetry	Space Group: P 21 21 2	R_factor 0.187 R_Free 0.249
crystal cell	length a length b length c angle alpha angle beta angle gamma 74.138 90.526 147.448 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.60 Å
ligand	FMT, MLI	enzyme	Hydrolase E.C.3.1.3.48 BRENDA
Primary reference	Structural Basis for Interactions Between Contactin Family Members and Protein Tyrosine Phosphatase Receptor Type G in Neural Tissues., Nikolaienko RM, Hammel M, Dubreuil V, Zalmai R, Hall DR, Mehzabeen N, Karuppan SJ, Harroch S, Stella SL, Bouyain S, J Biol Chem. 2016 Aug 18. pii: jbc.M116.742163. PMID:27539848

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (314 Kb) [Save to disk] Biological Unit Coordinates (5e5r.pdb1.gz) 154 Kb Biological Unit Coordinates (5e5r.pdb2.gz) 158 Kb LPC: Ligand-Protein Contacts for 5E5R CSU: Contacts of Structural Units for 5E5R Structure Factors (229 Kb) Retrieve 5E5R in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5E5R from S2C, [Save to disk] Re-refined 5e5r structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5E5R in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5E5R

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Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5e5r_C] [5e5r_D] [5e5r_B] [5e5r_A] [5e5r] SWISS-PROT database: Domain organization of by SWISSPFAM Domains found in 5E5R: [Carb_anhydrase] [IG_like] [IGc2 ] by SMART

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