5EIB	Cell Cycle	date	Oct 29, 2015
title	Crystal Structure Of Cpap Pn2-3 C-Terminal Loop-Helix In Com Darpin-Tubulin
authors	H.Li, X.Zheng
compound		source
Molecule: Tubulin Alpha-1b Chain Chain: C Synonym: Alpha-Tubulin Ubiquitous,Tubulin K-Alpha-1,Tubulin Ubiquitous Chain;		Organism_scientific: Bos Taurus Organism_common: Bovine Organism_taxid: 9913
Molecule: Tubulin Beta-2b Chain Chain: D		Organism_scientific: Bos Taurus Organism_common: Bovine Organism_taxid: 9913
Molecule: Designed Ankyrin Repeat Protein Chain: E Engineered: Yes		Organism_scientific: Synthetic Construct Organism_taxid: 32630 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Peptide From Centromere Protein J Chain: F Synonym: Cenp-J,Centrosomal P4.1-Associated Protein,Lag-3-A Protein,Lyst-Interacting Protein 1; Engineered: Yes		Synthetic: Yes Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606
symmetry	Space Group: P 1 21 1	R_factor 0.178 R_Free 0.222
crystal cell	length a length b length c angle alpha angle beta angle gamma 73.856 91.116 83.310 90.00 96.97 90.00
method	X-Ray Diffraction	resolution	2.10 Å
ligand	GTP, MG	enzyme
Gene Ontology	Chain Function Process Component C D
Primary reference	Molecular basis for CPAP-tubulin interaction in controlling centriolar and ciliary length., Zheng X, Ramani A, Soni K, Gottardo M, Zheng S, Ming Gooi L, Li W, Feng S, Mariappan A, Wason A, Widlund P, Pozniakovsky A, Poser I, Deng H, Ou G, Riparbelli M, Giuliano C, Hyman AA, Sattler M, Gopalakrishnan J, Li H, Nat Commun. 2016 Jun 16;7:11874. doi: 10.1038/ncomms11874. PMID:27306797

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (179 Kb) [Save to disk] Biological Unit Coordinates (5eib.pdb1.gz) 173 Kb LPC: Ligand-Protein Contacts for 5EIB CSU: Contacts of Structural Units for 5EIB Structure Factors (1100 Kb) Retrieve 5EIB in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5EIB from S2C, [Save to disk] Re-refined 5eib structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5EIB in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5EIB

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5eib_C] [5eib_D] [5eib] [5eib_F] [5eib_E] SWISS-PROT database: Domain organization of by SWISSPFAM Domains found in 5EIB: [ANK] [Tubulin] [Tubulin_C ] by SMART

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