5ELJ	Signaling Protein	date	Nov 04, 2015
title	Isoform-Specific Inhibition Of Sumo-Dependent Protein-Protei Interactions
authors	D.J.Hughes, C.Tiede, N.Hall, A.A.S.Tang, C.H.Trinh, K.Zajac, U.Man G.Howell, T.A.Edwards, M.J.Mcpherson, D.C.Tomlinson, A.Whitehou
compound		source
Molecule: Sumo-Affirmer-S2d5 Chain: A Engineered: Yes		Organism_scientific: Synthetic Construct Organism_taxid: 32630 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet11
Molecule: Small Ubiquitin-Related Modifier 1 Chain: B Synonym: Sumo-1,Gap-Modifying Protein 1,Gmp1,Smt3 Homolog 3 Ubiquitin-Homology Domain Protein Pic1,Ubiquitin-Like Prote Smt3c,Ubiquitin-Like Protein Ubl1; Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Sumo1, Smt3c, Smt3h3, Ubl1, Oksw-Cl.43 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet11
symmetry	Space Group: P 21 21 21	R_factor 0.188 R_Free 0.236
crystal cell	length a length b length c angle alpha angle beta angle gamma 36.230 70.720 83.630 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.98 Å
Gene Ontology	Chain Function Process Component A
Primary reference	Generation of specific inhibitors of SUMO-1- and SUMO-2/3-mediated protein-protein interactions using Affimer (Adhiron) technology., Hughes DJ, Tiede C, Penswick N, Tang AA, Trinh CH, Mandal U, Zajac KZ, Gaule T, Howell G, Edwards TA, Duan J, Feyfant E, McPherson MJ, Tomlinson DC, Whitehouse A, Sci Signal. 2017 Nov 14;10(505). pii: 10/505/eaaj2005. doi:, 10.1126/scisignal.aaj2005. PMID:29138295

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (63 Kb) [Save to disk] Biological Unit Coordinates (5elj.pdb1.gz) 33 Kb Biological Unit Coordinates (5elj.pdb2.gz) 27 Kb Biological Unit Coordinates (5elj.pdb3.gz) 59 Kb CSU: Contacts of Structural Units for 5ELJ Structure Factors (165 Kb) Retrieve 5ELJ in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5ELJ from S2C, [Save to disk] Re-refined 5elj structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5ELJ in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5ELJ

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5elj_B] [5elj] [5elj_A] SWISS-PROT database: Domain organization of by SWISSPFAM Domains found in 5ELJ: [CY] [UBQ ] by SMART

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