5EO1 Immune System date Nov 10, 2015
title Crystal Structure Of Hla-B0702-Rl9
authors T.M.Josephs, S.Gras, J.Rossjohn
compound source
Molecule: Hla Class I Histocompatibility Antigen, B-7 Alpha
Chain: A
Synonym: Mhc Class I Antigen B7
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Hla-B, Hlab
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet

Molecule: Beta-2-Microglobulin
Chain: B
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: B2m, Cdabp0092, Hdcma22p
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet

Molecule: Rl9 Peptide
Chain: C
Engineered: Yes

Synthetic: Yes
Organism_scientific: Synthetic Construct
Organism_taxid: 32630
Other_details: Synthetic
symmetry Space Group: P 21 21 21
R_factor 0.201 R_Free 0.259
crystal
cell
length a length b length c angle alpha angle beta angle gamma
50.662 81.857 110.366 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.85 Å
Gene
Ontology
ChainFunctionProcessComponent
B
  • cellular response to iron io...

  • Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (81 Kb) [Save to disk]
  • Biological Unit Coordinates (5eo1.pdb1.gz) 77 Kb
  • CSU: Contacts of Structural Units for 5EO1
  • Structure Factors (2653 Kb)
  • Retrieve 5EO1 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5EO1 from S2C, [Save to disk]
  • Re-refined 5eo1 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5EO1 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5EO1
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5eo1] [5eo1_B] [5eo1_C] [5eo1_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 5EO1: [IGc1 ] by SMART
  • Other resources with information on 5EO1
  • Community annotation for 5EO1 at PDBWiki (http://pdbwiki.org)

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science