5FAE Structural Protein date Dec 11, 2015
title N184k Pathological Variant Of Gelsolin Domain 2 (Trigonal Fo
authors F.Boni, M.Milani, S.Ricagno, M.Bolognesi, M.De Rosa
compound source
Molecule: Gelsolin
Chain: A
Fragment: Unp Residues 178-293
Synonym: Agel,Actin-Depolymerizing Factor,Adf,Brevin
Engineered: Yes
Mutation: Yes
Other_details: Domain 2
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Gsn
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 31 2 1
R_factor 0.182 R_Free 0.225
crystal
cell
length a length b length c angle alpha angle beta angle gamma
46.919 46.919 84.623 90.00 90.00 120.00
method X-Ray Diffractionresolution 1.70 Å
ligand CA, CL, PEG, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (46 Kb) [Save to disk]
  • Biological Unit Coordinates (5fae.pdb1.gz) 39 Kb
  • LPC: Ligand-Protein Contacts for 5FAE
  • CSU: Contacts of Structural Units for 5FAE
  • Structure Factors (159 Kb)
  • Retrieve 5FAE in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5FAE from S2C, [Save to disk]
  • Re-refined 5fae structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5FAE in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5FAE
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5fae_A] [5fae]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 5FAE: [GEL ] by SMART
    • Other resources with information on 5FAE
  • Community annotation for 5FAE at PDBWiki (http://pdbwiki.org)

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