5FHX	Immune System	date	Dec 22, 2015
title	Crystal Structure Of Codv In Complex With Il4 At 2.55 Ang. R
authors	F.Vallee, A.Dupuy, A.Rak
compound		source
Molecule: Interleukin-4 Chain: A Synonym: Il-4,B-Cell Stimulatory Factor 1,Bsf-1,Binetrakin, Stimulatory Factor 1,Pitrakinra; Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Il4 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Antibody Fragment Heavy-Chain Chain: H Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Antibody Fragment Light Chain Chain: L Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 1 21 1	R_factor 0.184 R_Free 0.249
crystal cell	length a length b length c angle alpha angle beta angle gamma 77.210 73.330 91.400 90.00 112.72 90.00
method	X-Ray Diffraction	resolution	2.55 Å
ligand	PO4	enzyme
Gene Ontology	Chain Function Process Component A positive regulation of recep...
Primary reference	CODV-Ig, a universal bispecific tetravalent and multifunctional immunoglobulin format for medical applications., Steinmetz A, Vallee F, Beil C, Lange C, Baurin N, Beninga J, Capdevila C, Corvey C, Dupuy A, Ferrari P, Rak A, Wonerow P, Kruip J, Mikol V, Rao E, MAbs. 2016 Mar 16:1-12. PMID:26984268

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (134 Kb) [Save to disk] Biological Unit Coordinates (5fhx.pdb1.gz) 129 Kb LPC: Ligand-Protein Contacts for 5FHX CSU: Contacts of Structural Units for 5FHX Structure Factors (861 Kb) Retrieve 5FHX in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5FHX from S2C, [Save to disk] Re-refined 5fhx structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5FHX in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5FHX

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5fhx] [5fhx_A] [5fhx_H] [5fhx_L] SWISS-PROT database: Domain organization of by SWISSPFAM Domains found in 5FHX: [IG_like] [IGv] [IL4_13 ] by SMART

Other resources with information on 5FHX

Community annotation for 5FHX at PDBWiki (http://pdbwiki.org)

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