5FOK Metal Transport date Nov 23, 2015
title Crystal Structure Of The Siderophore Receptor Piua From Pseu Aeruginosa
authors L.Moynie, J.H.Naismith
compound source
Molecule: Iron Transport Outer Membrane Receptor
Chain: A, B
Engineered: Yes
 Organism_scientific: Pseudomonas Aeruginosa
Organism_taxid: 208964
Strain: Pao1
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_variant: C43
Expression_system_vector_type: Plasmid
Expression_system_vector: Pet20b
symmetry Space Group: C 1 2 1
R_factor 0.188 R_Free 0.211
crystal
cell
length a length b length c angle alpha angle beta angle gamma
194.010 132.970 73.590 90.00 102.21 90.00
method X-Ray Diffractionresolution 1.90 Å
ligand C8E, NA, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • siderophore uptake transmemb...


    • Primary referenceStructure and Function of the PiuA and PirA Siderophore-Drug Receptors from Pseudomonas aeruginosa and Acinetobacter baumannii., Moynie L, Luscher A, Rolo D, Pletzer D, Tortajada A, Weingart H, Braun Y, Page MG, Naismith JH, Kohler T, Antimicrob Agents Chemother. 2017 Mar 24;61(4). pii: e02531-16. doi:, 10.1128/AAC.02531-16. Print 2017 Apr. PMID:28137795
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (437 Kb) [Save to disk]
  • Biological Unit Coordinates (5fok.pdb1.gz) 218 Kb
  • Biological Unit Coordinates (5fok.pdb2.gz) 213 Kb
  • LPC: Ligand-Protein Contacts for 5FOK
  • CSU: Contacts of Structural Units for 5FOK
  • Structure Factors (2631 Kb)
  • Retrieve 5FOK in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5FOK from S2C, [Save to disk]
  • Re-refined 5fok structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5FOK in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5FOK
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5fok_B] [5fok] [5fok_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 5FOK
  • Community annotation for 5FOK at PDBWiki (http://pdbwiki.org)

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