5FWG Transferase date Nov 08, 1997
title Tetra-(5-Fluorotryptophanyl)-Glutathione Transferase
authors J.F.Parsons, G.Xiao, R.N.Armstrong, G.L.Gilliland
compound source
Molecule: Tetra-(5-Fluorotryptophanyl)-Glutathione Transfer Class;
Chain: A, B
Synonym: Rat Mu Class Gst, Rat M1-1 Gst
Ec: 2.5.1.18
Engineered: Yes
Mutation: Yes
Organism_scientific: Rattus Norvegicus
Organism_common: Norway Rat
Organism_taxid: 10116
Cell_line: Bl21
Organ: Liver
Gene: Cdna Insert Of 3-3 (M1-1) Enzy
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21 (De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Psw1gst33
Expression_system_gene: Cdna Insert Of 3-3 (M1-1) Enzyme
symmetry Space Group: C 1 2 1
R_factor
R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
86.939 68.747 80.539 90.00 105.08 90.00
method X-Ray Diffractionresolution 2.00 Å
ligand FTR, GPR enzyme Transferase E.C.2.5.1.18 BRENDA
related structures by homologous chain: 1XW6, 5GST
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceEnzymes harboring unnatural amino acids: mechanistic and structural analysis of the enhanced catalytic activity of a glutathione transferase containing 5-fluorotryptophan., Parsons JF, Xiao G, Gilliland GL, Armstrong RN, Biochemistry. 1998 May 5;37(18):6286-94. PMID:9572843
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (88 Kb) [Save to disk]
  • Biological Unit Coordinates (5fwg.pdb1.gz) 82 Kb
  • LPC: Ligand-Protein Contacts for 5FWG
  • CSU: Contacts of Structural Units for 5FWG
  • Likely Quarternary Molecular Structure file(s) for 5FWG
  • Structure Factors (194 Kb)
  • Retrieve 5FWG in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5FWG from S2C, [Save to disk]
  • Re-refined 5fwg structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5FWG in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5FWG
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 5FWG, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d5fwga2, region A:1-84 [Jmol] [rasmolscript] [script source]
        - Domain d5fwga1, region A:85-217 [Jmol] [rasmolscript] [script source]
        - Domain d5fwgb2, region B:1-84 [Jmol] [rasmolscript] [script source]
        - Domain d5fwgb1, region B:85-217 [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5fwg_B] [5fwg_A] [5fwg]
  • SWISS-PROT database: [P04905]
  • Domain organization of [GSTM1_RAT] by SWISSPFAM
  • Other resources with information on 5FWG
  • Community annotation for 5FWG at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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