5FXY	Transcription	date	Mar 03, 2016
title	Structure Of The Human Rbbp4:Mta1(464-546) Complex
authors	C.J.Millard, N.Varma, L.Fairall, J.W.R.Schwabe
compound		source
Molecule: Histone-Binding Protein Rbbp4 Chain: A, C, E, G Synonym: Chromatin Assembly Factor 1 Subunit C, Caf-1 Subun Omatin Assembly Factor I P48 Subunit, Caf-I 48 Kda Subunit, P48, Nucleosome-Remodeling Factor Subunit Rbap48, Retinobla Inding Protein 4, Rbbp-4, Retinoblastoma-Binding Protein P4 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Homo Sapiens Expression_system_common: Human Expression_system_taxid: 9606 Expression_system_cell_line: Hek293f Expression_system_vector_type: Plasmid Expression_system_plasmid: Pcdna3
Molecule: Metastasis-Associated Protein Mta1 Chain: B, D, F, H Fragment: Residues 464-546 Synonym: Mta1 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Homo Sapiens Expression_system_common: Human Expression_system_taxid: 9606 Expression_system_cell_line: Hek293f Expression_system_vector_type: Plasmid Expression_system_plasmid: Pcdna3
symmetry	Space Group: P 1 21 1	R_factor 0.249 R_Free 0.291
crystal cell	length a length b length c angle alpha angle beta angle gamma 81.294 150.072 95.591 90.00 94.54 90.00
method	X-Ray Diffraction	resolution	3.20 Å
Gene Ontology	Chain Function Process Component A, C, G, E
Primary reference	The structure of the core NuRD repression complex provides insights into its interaction with chromatin., Millard CJ, Varma N, Saleh A, Morris K, Watson PJ, Bottrill AR, Fairall L, Smith CJ, Schwabe JW, Elife. 2016 Apr 21;5. pii: e13941. doi: 10.7554/eLife.13941. PMID:27098840

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (289 Kb) [Save to disk] Biological Unit Coordinates (5fxy.pdb1.gz) 74 Kb Biological Unit Coordinates (5fxy.pdb2.gz) 74 Kb Biological Unit Coordinates (5fxy.pdb3.gz) 74 Kb Biological Unit Coordinates (5fxy.pdb4.gz) 74 Kb CSU: Contacts of Structural Units for 5FXY Structure Factors (1969 Kb) Retrieve 5FXY in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5FXY from S2C, [Save to disk] Re-refined 5fxy structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5FXY in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5FXY

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5fxy_C] [5fxy_H] [5fxy_E] [5fxy_D] [5fxy_G] [5fxy_A] [5fxy_F] [5fxy] [5fxy_B] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 5FXY: [WD40 ] by SMART

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Community annotation for 5FXY at PDBWiki (http://pdbwiki.org)

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