5GGE Lipid Binding Protein date Jun 15, 2016
title Fatty Acid-Binding Protein In Brain Tissue Of Drosophila Mel
authors Y.Y.Cheng, Y.F.Huang, H.H.Lin, W.W.Chang, P.C.Lyu
compound source
Molecule: Fatty Acid Bindin Protein, Isoform B
Chain: A
Synonym: Rh06221p,Rh49003p
Engineered: Yes
 Organism_scientific: Drosophila Melanogaster
Organism_common: Fruit Fly
Organism_taxid: 7227
Gene: Fabp, Cg6783, Dmel_cg6783
Expression_system: Escherichia Coli Bl21
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_vector_type: Plasmid
symmetry Space Group: I 4 2 2
R_factor 0.179 R_Free 0.246
crystal
cell
length a length b length c angle alpha angle beta angle gamma
61.698 61.698 137.321 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.86 Å
ligand CIT enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (47 Kb) [Save to disk]
  • Biological Unit Coordinates (5gge.pdb1.gz) 42 Kb
  • LPC: Ligand-Protein Contacts for 5GGE
  • CSU: Contacts of Structural Units for 5GGE
  • Structure Factors (84 Kb)
  • Retrieve 5GGE in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5GGE from S2C, [Save to disk]
  • Re-refined 5gge structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5GGE in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5GGE
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5gge_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 5GGE
  • Community annotation for 5GGE at PDBWiki (http://pdbwiki.org)

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