5GKO Membrane Protein date Jul 04, 2016
title Crystal Structure Of Tripartite-Type Abc Transporter, Macb F Acinetobacter Baumannii
authors S.Murakami, U.Okada, E.Yamashita
compound source
Molecule: Macrolide Export Atp-Bindingpermease Protein Mac
Chain: A, B
Ec: 3.6.3.-
Engineered: Yes
 Organism_scientific: Acinetobacter Baumannii
Organism_taxid: 470
Gene: Macb
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
symmetry Space Group: P 41 21 2
R_factor 0.223 R_Free 0.255
crystal
cell
length a length b length c angle alpha angle beta angle gamma
229.148 229.148 155.644 90.00 90.00 90.00
method X-Ray Diffractionresolution 3.39 Å
ligand MSE enzyme Hydrolase E.C.3.6.3 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (437 Kb) [Save to disk]
  • Biological Unit Coordinates (5gko.pdb1.gz) 428 Kb
  • LPC: Ligand-Protein Contacts for 5GKO
  • CSU: Contacts of Structural Units for 5GKO
  • Structure Factors (997 Kb)
  • Retrieve 5GKO in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5GKO from S2C, [Save to disk]
    • View 5GKO in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5GKO
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5gko_B] [5gko_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 5GKO
  • Community annotation for 5GKO at PDBWiki (http://pdbwiki.org)

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