5GL1 Transport Protein Isomerase date 6-0 20, 2000
authors X.C.Bai, Z.Yan, J.P.Wu, N.Yan
compound source
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
482.400 482.400 482.400 90.00 90.00 90.00
method X-Ray Diffractionresolution
Gene
Ontology
ChainFunctionProcessComponent
A, E, C, G


F, B, H, D
  • peptidyl-prolyl cis-trans is...


  • Primary referenceThe Central domain of RyR1 is the transducer for long-range allosteric gating of channel opening., Bai XC, Yan Z, Wu J, Li Z, Yan N, Cell Res. 2016 Sep;26(9):995-1006. doi: 10.1038/cr.2016.89. Epub 2016 Jul 29. PMID:27468892
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1625 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 5GL1
  • Retrieve 5GL1 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5GL1 from S2C, [Save to disk]
  • View 5GL1 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5GL1
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5gl1_E] [5gl1_F] [5gl1_H] [5gl1_B] [5gl1_D] [5gl1_A] [5gl1_G] [5gl1] [5gl1_C]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 5GL1: [MIR] [SPRY ] by SMART
  • Other resources with information on 5GL1
  • Community annotation for 5GL1 at PDBWiki (http://pdbwiki.org)

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