5GSS	Transferase	date	Aug 11, 1997
title	Human Glutathione S-Transferase P1-1, Complex With Glutathio
authors	A.Oakley, M.Parker
compound		source
Molecule: Glutathione S-Transferase P1-1 Chain: A, B Fragment: Two Intact Monomers Synonym: Gstp1-1 Ec: 2.5.1.18 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Organ: Placenta Cellular_location: Cytoplasm Gene: Gtp_human Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: C 1 2 1	R_factor 0.222 R_Free 0.255
crystal cell	length a length b length c angle alpha angle beta angle gamma 78.336 89.228 68.728 90.00 97.00 90.00
method	X-Ray Diffraction	resolution	1.95 Å
ligand	GSH, MES	enzyme	Transferase E.C.2.5.1.18 BRENDA
related structures	by homologous chain: 1AQV, 1BAY
Gene	GTP (H. sapiens)
Gene Ontology	Chain Function Process Component A, B glutathione peroxidase activ... protein binding
Primary reference	The structures of human glutathione transferase P1-1 in complex with glutathione and various inhibitors at high resolution., Oakley AJ, Lo Bello M, Battistoni A, Ricci G, Rossjohn J, Villar HO, Parker MW, J Mol Biol 1997 Nov 21;274(1):84-100. PMID:9398518

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (75 Kb) [Save to disk] Biological Unit Coordinates (5gss.pdb1.gz) 71 Kb LPC: Ligand-Protein Contacts for 5GSS CSU: Contacts of Structural Units for 5GSS Likely Quarternary Molecular Structure file(s) for 5GSS Structure Factors (303 Kb) Retrieve 5GSS in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5GSS from S2C, [Save to disk] Re-refined 5gss structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5GSS in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5GSS

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 5GSS, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d5gssa2, region A:2-76 [Jmol] [rasmolscript] [script source]     - Domain d5gssa1, region A:77-209 [Jmol] [rasmolscript] [script source]     - Domain d5gssb2, region B:2-76 [Jmol] [rasmolscript] [script source]     - Domain d5gssb1, region B:77-209 [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5gss_A] [5gss_B] [5gss] SWISS-PROT database: [P09211] Domain organization of [GSTP1_HUMAN] by SWISSPFAM

Other resources with information on 5GSS

Community annotation for 5GSS at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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