5H36 Membrane Protein date Oct 20, 2016
title Crystal Structures Of The Tric Trimeric Intracellular Cation Orthologue From Rhodobacter Sphaeroides
authors G.Kasuya, M.Hiraizumi, M.Hattori, O.Nureki
compound source
Molecule: Uncharacterized Protein Tric
Chain: E, A
Fragment: Unp Residues 1-204
Engineered: Yes
 Organism_scientific: Rhodobacter Sphaeroides (Strain Atcc 1 2.4.1 Ncib 8253 Dsm 158);
Organism_taxid: 272943
Strain: Atcc 17023 2.4.1 Ncib 8253 Dsm 158
Gene: Rsp_3856
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
symmetry Space Group: H 3
R_factor 0.247 R_Free 0.273
crystal
cell
length a length b length c angle alpha angle beta angle gamma
156.010 156.010 82.370 90.00 90.00 120.00
method X-Ray Diffractionresolution 3.41 Å
ligand PX4 enzyme
Gene RSP
Gene
Ontology
ChainFunctionProcessComponent
A, E


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (62 Kb) [Save to disk]
  • Biological Unit Coordinates (5h36.pdb1.gz) 86 Kb
  • Biological Unit Coordinates (5h36.pdb2.gz) 84 Kb
  • LPC: Ligand-Protein Contacts for 5H36
  • CSU: Contacts of Structural Units for 5H36
  • Structure Factors (124 Kb)
  • Retrieve 5H36 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5H36 from S2C, [Save to disk]
  • Re-refined 5h36 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5H36 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5H36
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5h36] [5h36_E] [5h36_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 5H36
  • Community annotation for 5H36 at PDBWiki (http://pdbwiki.org)

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