5HEH Transport Protein date Jan 06, 2016
title Pentameric Ligand-Gated Ion Channel Glic Mutant P246a
authors C.Bertozzi, R.Dutzler
compound source
Molecule: Proton-Gated Ion Channel
Chain: A, B, C, D, E
Synonym: Glic,Ligand-Gated Ion Channel,Lgic
Engineered: Yes
Mutation: Yes
Organism_scientific: Gloeobacter Violaceus
Organism_taxid: 33072
Gene: Glvi, Glr4197
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: C 1 2 1
R_factor 0.244 R_Free 0.280
crystal
cell
length a length b length c angle alpha angle beta angle gamma
177.690 133.940 159.830 90.00 101.10 90.00
method X-Ray Diffractionresolution 3.30 Å
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, E, B
  • sodium channel activity


  • Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (535 Kb) [Save to disk]
  • Biological Unit Coordinates (5heh.pdb1.gz) 527 Kb
  • CSU: Contacts of Structural Units for 5HEH
  • Structure Factors (468 Kb)
  • Retrieve 5HEH in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5HEH from S2C, [Save to disk]
  • Re-refined 5heh structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5HEH in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5HEH
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5heh_D] [5heh_A] [5heh_C] [5heh] [5heh_E] [5heh_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5HEH
  • Community annotation for 5HEH at PDBWiki (http://pdbwiki.org)

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