5HQZ Oxidoreductase Oxidoreductase Inhibitor date Jan 22, 2016
title Fluorine Substituted 5-Methyl-6-(4'-Trifluoromethoxyphenythi Thieno[2,3-D]Pyrimidine-2,4-Diamine
authors V.Cody
compound source
Molecule: Dihydrofolate Reductase
Chain: A
Ec: 1.5.1.3
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Dhfr
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_plasmid: Pds5
symmetry Space Group: H 3
R_factor 0.192 R_Free 0.227
crystal
cell
length a length b length c angle alpha angle beta angle gamma
84.507 84.507 77.548 90.00 90.00 120.00
method X-Ray Diffractionresolution 1.46 Å
ligand 64J, NDP enzyme Oxidoreductase E.C.1.5.1.3 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (40 Kb) [Save to disk]
  • Biological Unit Coordinates (5hqz.pdb1.gz) 35 Kb
  • LPC: Ligand-Protein Contacts for 5HQZ
  • CSU: Contacts of Structural Units for 5HQZ
  • Structure Factors (757 Kb)
  • Retrieve 5HQZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5HQZ from S2C, [Save to disk]
  • Re-refined 5hqz structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5HQZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5HQZ
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5hqz] [5hqz_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 5HQZ
  • Community annotation for 5HQZ at PDBWiki (http://pdbwiki.org)

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