5HZW	Signaling Protein	date	Feb 03, 2016
title	Crystal Structure Of The Orphan Region Of Human Endoglincd1 Complex With Bmp9
authors	M.Bokhove, T.Saito, L.Jovine
compound		source
Molecule: Maltose-Binding Periplasmic Protein,Endoglin Chain: A Fragment: Unp Residues 27-393,Unp Residues 25-337,Unp Resid 393,Unp Residues 25-337; Synonym: Mbp,Mmbp,Maltodextrin-Binding Protein Engineered: Yes Mutation: Yes Other_details: This Protein Is A Chimera. Residues 56-422 A Coli Maltose Binding Protein (Mbp), Correspond To Residues Swiss-Prot Database Entry P0aex9 And Contain Mutations I57t K138a, E227a, N228a, A270h, K274h, K294a, A367v, I372v, E41 D418a And R422n (Corresponding To I28t, D108a, K109a, E198a A241h, K245h, K265a, A338v, I343v, E385a, E388a, D389a And P0aex9). Residues 426-737 Are From Human Endoglin Protein A Correspond To Residues 26-337 Of Swiss-Prot Database Entry Subtracting 400 From The Pdb Entry Residue Numbering Result Numbering According To Uniprot Entry P17813.;		Organism_scientific: Escherichia Coli K12, Homo Sapiens Organism_common: Human Organism_taxid: 83333, 9606 Cell: Endothelial Gene: Male, B4034, Jw3994, Eng, End Expression_system: Homo Sapiens Expression_system_common: Human Expression_system_taxid: 9606 Expression_system_cell_line: Hek293s Expression_system_atcc_number: Crl-3022 Expression_system_vector_type: Plasmid Expression_system_plasmid: Phlsec
Molecule: Growthdifferentiation Factor 2 Chain: B Fragment: Unp Residues 320-429 Synonym: Gdf-2,Bone Morphogenetic Protein 9,Bmp-9 Engineered: Yes Other_details: Mature Bmp9		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Gdf2, Bmp9 Expression_system: Homo Sapiens Expression_system_common: Human Expression_system_taxid: 9606 Expression_system_cell_line: Hek293s Expression_system_atcc_number: Crl-3022 Expression_system_vector_type: Plasmid Expression_system_plasmid: Phlsec
symmetry	Space Group: P 64	R_factor 0.286 R_Free 0.318
crystal cell	length a length b length c angle alpha angle beta angle gamma 211.245 211.245 53.164 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	4.45 Å
ligand	GLC, NAG	enzyme
Gene Ontology	Chain Function Process Component A carbohydrate transmembrane t... B
Primary reference	Structural Basis of the Human Endoglin-BMP9 Interaction: Insights into BMP Signaling and HHT1., Saito T, Bokhove M, Croci R, Zamora-Caballero S, Han L, Letarte M, de Sanctis D, Jovine L, Cell Rep. 2017 May 30;19(9):1917-1928. doi: 10.1016/j.celrep.2017.05.011. PMID:28564608

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (364 Kb) [Save to disk] Biological Unit Coordinates (5hzw.pdb1.gz) 711 Kb LPC: Ligand-Protein Contacts for 5HZW CSU: Contacts of Structural Units for 5HZW Structure Factors (126 Kb) Retrieve 5HZW in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5HZW from S2C, [Save to disk] Re-refined 5hzw structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5HZW in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5HZW

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5hzw_B] [5hzw_A] SWISS-PROT database: Domain organization of by SWISSPFAM

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