5IA1	Transferase	date	Feb 21, 2016
title	Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kina Mln8054
authors	D.Kudlinzki, V.L.Linhard, S.L.Gande, S.Sreeramulu, K.Saxena, S.He G.Medard, B.Kuester, H.Schwalbe
compound		source
Molecule: Ephrin Type-A Receptor 2 Chain: A Fragment: Unp Residues 596-900 Synonym: Epithelial Cell Kinase,Tyrosine-Protein Kinase Rec Ec: 2.7.10.1 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Epha2, Eck Expression_system: Spodoptera Frugiperda Expression_system_common: Fall Armyworm Expression_system_taxid: 7108 Expression_system_cell_line: Sf9
symmetry	Space Group: P 1 21 1	R_factor 0.181 R_Free 0.223
crystal cell	length a length b length c angle alpha angle beta angle gamma 32.714 106.741 40.729 90.00 108.79 90.00
method	X-Ray Diffraction	resolution	2.04 Å
ligand	EDO, ZZL	enzyme	Transferase E.C.2.7.10.1 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Chemical proteomics and structural biology define EPHA2 inhibition by clinical kinase drugs., Heinzlmeir S, Kudlinzki D, Sreeramulu S, Klaeger S, Gande SL, Linhard V, Wilhelm M, Qiao H, Helm D, Ruprecht B, Saxena K, Medard G, Schwalbe H, Kuster B, ACS Chem Biol. 2016 Oct 21. PMID:27768280

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (51 Kb) [Save to disk] Biological Unit Coordinates (5ia1.pdb1.gz) 46 Kb LPC: Ligand-Protein Contacts for 5IA1 CSU: Contacts of Structural Units for 5IA1 Structure Factors (155 Kb) Retrieve 5IA1 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5IA1 from S2C, [Save to disk] Re-refined 5ia1 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5IA1 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5IA1

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1i5ia1, region A:1-85 [Jmol] [rasmolscript] [script source]     - Domain d1g5ia1, region A:343-469 [Jmol] [rasmolscript] [script source]     - Domain d1r5ia1, region A:82-181 [Jmol] [rasmolscript] [script source]

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5ia1] [5ia1_A] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 5IA1: [TyrKc ] by SMART

Other resources with information on 5IA1

Community annotation for 5IA1 at PDBWiki (http://pdbwiki.org)

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---