5J3X	Ligase	date	Mar 31, 2016
title	Structure Of C-Cbl Y371f
authors	D.T.Huang, L.Buetow, H.Dou
compound		source
Molecule: E3 Ubiquitin-Protein Ligase Cbl Chain: A, B, C, D, E, F Fragment: Unp Residues 47-435 Synonym: Casitas B-Lineage Lymphoma Proto-Oncogene,Proto-On Cbl,Ring Finger Protein 55,Signal Transduction Protein Cbl; Ec: 6.3.2.- Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Cbl, Cbl2, Rnf55 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pgex4t1 Tev
symmetry	Space Group: C 2 2 21	R_factor 0.212 R_Free 0.254
crystal cell	length a length b length c angle alpha angle beta angle gamma 147.842 149.040 344.118 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.82 Å
ligand	CA, ZN	enzyme	Ligase E.C.6.3.2 BRENDA
Gene Ontology	Chain Function Process Component F, A, D, C, E, B

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (789 Kb) [Save to disk] Biological Unit Coordinates (5j3x.pdb1.gz) 134 Kb Biological Unit Coordinates (5j3x.pdb2.gz) 135 Kb Biological Unit Coordinates (5j3x.pdb3.gz) 135 Kb Biological Unit Coordinates (5j3x.pdb4.gz) 135 Kb Biological Unit Coordinates (5j3x.pdb5.gz) 133 Kb Biological Unit Coordinates (5j3x.pdb6.gz) 133 Kb LPC: Ligand-Protein Contacts for 5J3X CSU: Contacts of Structural Units for 5J3X Structure Factors (2283 Kb) Retrieve 5J3X in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5J3X from S2C, [Save to disk] Re-refined 5j3x structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5J3X in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5J3X

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5j3x_E] [5j3x_F] [5j3x_B] [5j3x] [5j3x_A] [5j3x_C] [5j3x_D] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 5J3X: [RING ] by SMART

Other resources with information on 5J3X

Community annotation for 5J3X at PDBWiki (http://pdbwiki.org)

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