5JA4	Chaperone	date	Apr 11, 2016
title	Crystal Structure Of Human Tonsl And Mcm2 Hbds Binding To A H3-H4 Tetramer
authors	H.Huang, D.Patel
compound		source
Molecule: Histone H3.3 Chain: A Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: H3f3a, H3.3a, H3f3, Pp781, H3f3b, H3.3b Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21-Codonplus(De3)-Ril
Molecule: Histone H4 Chain: B Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Hist1h4a, H4a, H4fa, Hist1h4b, H4i, H4fi, Hist1h4c, H4fg, Hist1h4d, H4b, H4fb, Hist1h4e, H4j, H4fj, Hist1h4f, H4fc, Hist1h4h, H4h, H4fh, Hist1h4i, H4m, H4fm, Hist1h4j, H4fe, Hist1h4k, H4d, H4fd, Hist1h4l, H4k, H4fk, Hist2h4a, H4f2, H4fn, Hist2h4, Hist2h4b, H4o, H4fo, Hist4h4; Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Dna Replication Licensing Factor Mcm2 Chain: C Synonym: Minichromosome Maintenance Protein 2 Homolog,Nucle Bm28; Ec: 3.6.4.12 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Mcm2, Bm28, Ccnl1, Cdcl1, Kiaa0030 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Tonsoku-Like Protein Chain: D Synonym: Inhibitor Of Kappa B-Related Protein,Ikappabr,Nf-K Inhibitor-Like Protein 2,Nuclear Factor Of Kappa Light Poly Gene Enhancer In B-Cells Inhibitor-Like 2; Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Tonsl, Ikbr, Nfkbil2 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 3 2 1	R_factor 0.201 R_Free 0.246
crystal cell	length a length b length c angle alpha angle beta angle gamma 139.506 139.506 72.896 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.42 Å
ligand	GOL, MES	enzyme	Hydrolase E.C.3.6.4.12 BRENDA
Gene Ontology	Chain Function Process Component A B C
Primary reference	H4K20me0 marks post-replicative chromatin and recruits the TONSL-MMS22L DNA repair complex., Saredi G, Huang H, Hammond CM, Alabert C, Bekker-Jensen S, Forne I, Reveron-Gomez N, Foster BM, Mlejnkova L, Bartke T, Cejka P, Mailand N, Imhof A, Patel DJ, Groth A, Nature. 2016 Jun 30;534(7609):714-8. PMID:27338793

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (135 Kb) [Save to disk] Biological Unit Coordinates (5ja4.pdb1.gz) 250 Kb LPC: Ligand-Protein Contacts for 5JA4 CSU: Contacts of Structural Units for 5JA4 Structure Factors (492 Kb) Retrieve 5JA4 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5JA4 from S2C, [Save to disk] Re-refined 5ja4 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5JA4 in 3D

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Visual 3D analysis of 5JA4

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5ja4] [5ja4_C] [5ja4_A] [5ja4_B] [5ja4_D] SWISS-PROT database: Domain organization of by SWISSPFAM Domains found in 5JA4: [ANK] [H3] [H4 ] by SMART

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