5JHM Viral Protein date Apr 21, 2016
title Crystal Structure Of Zika Virus Envelope Protein
authors L.Dai, Y.Shi, J.Qi, G.F.Gao
compound source
Molecule: Envelope Protein
Chain: A, B
Engineered: Yes
Organism_scientific: Zika Virus
Organism_common: Zikv
Organism_taxid: 64320
Strain: Beh818995
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 1 21 1
R_factor 0.208 R_Free 0.238
crystal
cell
length a length b length c angle alpha angle beta angle gamma
76.448 59.063 103.669 90.00 103.72 90.00
method X-Ray Diffractionresolution 2.00 Å
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (253 Kb) [Save to disk]
  • Biological Unit Coordinates (5jhm.pdb1.gz) 247 Kb
  • CSU: Contacts of Structural Units for 5JHM
  • Structure Factors (873 Kb)
  • Retrieve 5JHM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5JHM from S2C, [Save to disk]
  • Re-refined 5jhm structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5JHM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5JHM
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5jhm_A] [5jhm] [5jhm_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5JHM
  • Community annotation for 5JHM at PDBWiki (http://pdbwiki.org)

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