5JJ0	Transferase	date	Apr 22, 2016
title	Structure Of G9a Set-Domain With Histone H3k9m Peptide And E
authors	H.Jayaram, S.F.Bellon, F.Poy
compound		source
Molecule: Histone-Lysine N-Methyltransferase Ehmt2 Chain: A, B Fragment: Set Domain Of Histone-Lysine N-Methyltransferase Unp Residues 882-1155; Synonym: Euchromatic Histone-Lysine N-Methyltransferase 2,H Associated Transcript 8,Histone H3-K9 Methyltransferase 3,H Hmtase 3,Lysine N-Methyltransferase 1c,Protein G9a; Ec: 2.1.1.-,2.1.1.43 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Ehmt2, Bat8, C6orf30, G9a, Kmt1c, Ng36 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Histone H3k9m Mutant Peptide Chain: F, G Engineered: Yes		Organism_scientific: Homo Sapiens Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 1 21 1	R_factor 0.218 R_Free 0.252
crystal cell	length a length b length c angle alpha angle beta angle gamma 56.667 78.311 73.056 90.00 90.20 90.00
method	X-Ray Diffraction	resolution	1.72 Å
ligand	SAM, ZN	enzyme	Transferase E.C.2.1.1 BRENDA
Gene Ontology	Chain Function Process Component A, B
Primary reference	S-adenosyl methionine is necessary for inhibition of the methyltransferase G9a by the lysine 9 to methionine mutation on histone H3., Jayaram H, Hoelper D, Jain SU, Cantone N, Lundgren SM, Poy F, Allis CD, Cummings R, Bellon S, Lewis PW, Proc Natl Acad Sci U S A. 2016 May 31;113(22):6182-7. doi:, 10.1073/pnas.1605523113. Epub 2016 May 16. PMID:27185940

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (100 Kb) [Save to disk] Biological Unit Coordinates (5jj0.pdb1.gz) 95 Kb LPC: Ligand-Protein Contacts for 5JJ0 CSU: Contacts of Structural Units for 5JJ0 Structure Factors (1428 Kb) Retrieve 5JJ0 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5JJ0 from S2C, [Save to disk] Re-refined 5jj0 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5JJ0 in 3D

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Visual 3D analysis of 5JJ0

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5jj0_B] [5jj0_G] [5jj0_F] [5jj0] [5jj0_A] SWISS-PROT database: Domain organization of by SWISSPFAM Domains found in 5JJ0: [PostSET] [PreSET] [SET ] by SMART

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