5JRS Transferase Transferase Inhibitor date May 06, 2016
title Crystal Structure Of Bruton Agammaglobulinemia Tyrosine Kina Complexed With 4-[2-Fluoro-3-(4-Oxo -3,4-Dihydroquinazolin- Phenyl]-7-(2-Hydroxypropan-2-Y L)-9h-Carbazole-1-Carboxamid
authors J.K.Muckelbauer
compound source
Molecule: Tyrosine-Protein Kinase Btk
Chain: A, B
Fragment: Kinase Domain (Unp Residues 396-659
Synonym: Agammaglobulinemia Tyrosine Kinase,Atk,B-Cell Prog Kinase,Bpk,Bruton Tyrosine Kinase;
Ec: 2.7.10.2
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Btk, Agmx1, Atk, Bpk
Expression_system: Spodoptera Frugiperda
Expression_system_common: Fall Armyworm
Expression_system_taxid: 7108
Expression_system_cell_line: Sf9
Expression_system_vector_type: Baculovirus
symmetry Space Group: P 1 21 1
R_factor 0.202 R_Free 0.226
crystal
cell
length a length b length c angle alpha angle beta angle gamma
63.470 45.480 98.350 90.00 93.95 90.00
method X-Ray Diffractionresolution 1.97 Å
ligand 6MV enzyme Transferase E.C.2.7.10.2 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (160 Kb) [Save to disk]
  • Biological Unit Coordinates (5jrs.pdb1.gz) 154 Kb
  • Biological Unit Coordinates (5jrs.pdb2.gz) 82 Kb
  • Biological Unit Coordinates (5jrs.pdb3.gz) 75 Kb
  • LPC: Ligand-Protein Contacts for 5JRS
  • CSU: Contacts of Structural Units for 5JRS
  • Structure Factors (2570 Kb)
  • Retrieve 5JRS in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5JRS from S2C, [Save to disk]
  • Re-refined 5jrs structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5JRS in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5JRS
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5jrs_A] [5jrs_B] [5jrs]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 5JRS: [TyrKc ] by SMART
  • Other resources with information on 5JRS
  • Community annotation for 5JRS at PDBWiki (http://pdbwiki.org)

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