5JTB Membrane Protein date May 09, 2016
title Crystal Structure Of The Chimeric Protein Of A2aar-Bril With Iodide Ions
authors I.Melnikov, V.Polovinkin, M.Shevtsov, V.Borshchevskiy, V.Cherezo A.Popov, V.Gordeliy
compound source
Molecule: Adenosine Receptor A2a,Soluble Cytochrome B562,Ad Receptor A2a;
Chain: A
Fragment: Unp Residues 2-208,Unp Residues 23-217,Unp Residu 316,Unp Residues 2-208,Unp Residues 23-217,Unp Residues 219 Residues 2-208,Unp Residues 23-217,Unp Residues 219-316;
Synonym: Cytochrome B-562
Engineered: Yes
 Organism_scientific: Homo Sapiens, Escherichia Coli
Organism_common: Human
Organism_taxid: 9606, 562
Gene: Adora2a, Adora2, Cybc
Expression_system: Spodoptera Frugiperda
Expression_system_common: Fall Armyworm
Expression_system_taxid: 7108
symmetry Space Group: C 2 2 21
R_factor 0.234 R_Free 0.294
crystal
cell
length a length b length c angle alpha angle beta angle gamma
39.648 179.793 139.810 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.80 Å
ligand CLR, IOD, OLA, OLB, OLC, PEG, ZMA enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (145 Kb) [Save to disk]
  • Biological Unit Coordinates (5jtb.pdb1.gz) 134 Kb
  • LPC: Ligand-Protein Contacts for 5JTB
  • CSU: Contacts of Structural Units for 5JTB
  • Structure Factors (378 Kb)
  • Retrieve 5JTB in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5JTB from S2C, [Save to disk]
  • Re-refined 5jtb structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5JTB in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5JTB
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5jtb_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 5JTB
  • Community annotation for 5JTB at PDBWiki (http://pdbwiki.org)

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