5L82 Antibiotic date Jun 06, 2016
title Nmr Structure Of Enterocin K1 In 50%50% Tfewater
authors K.Ovchinnikov, P.E.Kristiansen, D.Diep
compound source
Molecule: Enterococcin K1
Chain: A
Engineered: Yes
Synthetic: Yes
Organism_scientific: Enterococcus Faecium Engen0026
Organism_taxid: 1138917
methodSolution NMR
Primary referenceThe Leaderless Bacteriocin Enterocin K1 Is Highly Potent against Enterococcus faecium: A Study on Structure, Target Spectrum and Receptor., Ovchinnikov KV, Kristiansen PE, Straume D, Jensen MS, Aleksandrzak-Piekarczyk T, Nes IF, Diep DB, Front Microbiol. 2017 May 3;8:774. doi: 10.3389/fmicb.2017.00774. eCollection, 2017. PMID:28515717
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (250 Kb) [Save to disk]
  • Biological Unit Coordinates (5l82.pdb1.gz) 13 Kb
  • CSU: Contacts of Structural Units for 5L82
  • Original NMR restraints for 5L82 from PDB
  • Retrieve 5L82 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5L82 from S2C, [Save to disk]
  • View 5L82 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5L82
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5l82_A] [5l82]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5L82
  • Community annotation for 5L82 at PDBWiki (http://pdbwiki.org)

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science