5LBE	Oxidoreductase	date	Jun 15, 2016
title	Hif Prolyl Hydroxylase 2 (Phd2egln1) G294e Variant In Compl Mn(II) And N-[(1-Chloro-4-Hydroxyisoquinolin-3-Yl)Carbonyl] (Iox3fg2216)
authors	R.Chowdhury, C.J.Schofield
compound		source
Molecule: Egl Nine Homolog 1 Chain: A Fragment: Catalytic Domain (181-426) Synonym: Hypoxia-Inducible Factor Prolyl Hydroxylase 2,Hph- Hydroxylase Domain-Containing Protein 2,Phd2,Sm-20; Ec: 1.14.11.29 Engineered: Yes Mutation: Yes Other_details: Fragment: Catalytic Domain (181-426)		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Egln1, C1orf12, Pnas-118, Pnas-137 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_vector_type: Plasmid Expression_system_vector: Pet28a(+) Expression_system_plasmid: Pet28a(+)
symmetry	Space Group: P 63	R_factor 0.164 R_Free 0.177
crystal cell	length a length b length c angle alpha angle beta angle gamma 110.450 110.450 39.654 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	1.75 Å
ligand	BCT, MN, UN9	enzyme	Oxidoreductase E.C.1.14.11.29 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Structural basis for oxygen degradation domain selectivity of the HIF prolyl hydroxylases., Chowdhury R, Leung IK, Tian YM, Abboud MI, Ge W, Domene C, Cantrelle FX, Landrieu I, Hardy AP, Pugh CW, Ratcliffe PJ, Claridge TD, Schofield CJ, Nat Commun. 2016 Aug 26;7:12673. doi: 10.1038/ncomms12673. PMID:27561929

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (114 Kb) [Save to disk] Biological Unit Coordinates (5lbe.pdb1.gz) 106 Kb LPC: Ligand-Protein Contacts for 5LBE CSU: Contacts of Structural Units for 5LBE Structure Factors (510 Kb) Retrieve 5LBE in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5LBE from S2C, [Save to disk] Re-refined 5lbe structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

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Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5lbe_A] [5lbe] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 5LBE: [P4Hc ] by SMART

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