5LWC Antimicrobial Protein date Sep 15, 2016
title Nmr Solution Structure Of Bacteriocin Bacsp222 From Staphylo Pseudintermedius 222
authors M.E.Nowakowski, A.O.Ejchart, L.Jaremko, B.Wladyka, P.Mak
compound source
Molecule: Bacteriocin Bacsp222
Chain: A
Other_details: The First Methionine Is N-Formylated
 Organism_scientific: Staphylococcus Pseudintermedius
Organism_taxid: 283734
methodSolution NMR
ligand FME enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceSpatial attributes of the four-helix bundle group of bacteriocins - The high-resolution structure of BacSp222 in solution., Nowakowski M, Jaremko L, Wladyka B, Dubin G, Ejchart A, Mak P, Int J Biol Macromol. 2018 Feb;107(Pt B):2715-2724. doi:, 10.1016/j.ijbiomac.2017.10.158. Epub 2017 Oct 31. PMID:29107139
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (273 Kb) [Save to disk]
  • Biological Unit Coordinates (5lwc.pdb1.gz) 14 Kb
  • LPC: Ligand-Protein Contacts for 5LWC
  • CSU: Contacts of Structural Units for 5LWC
  • Original NMR restraints for 5LWC from PDB
  • Retrieve 5LWC in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5LWC from S2C, [Save to disk]
    • View 5LWC in 3D
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  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
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    • Visual 3D analysis of 5LWC
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5lwc_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 5LWC
  • Community annotation for 5LWC at PDBWiki (http://pdbwiki.org)

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