5LX6	Transferase	date	Sep 20, 2016
title	Human Parp10 (Artd10), Catalytic Fragment In Complex With Pa Inhibitor Veliparib
authors	T.Karlberg, A.G.Thorsell, H.Schuler
compound		source
Molecule: Poly [Adp-Ribose] Polymerase 10 Chain: A, B Synonym: Parp-10,Adp-Ribosyltransferase Diphtheria Toxin-Li Artd10; Ec: 2.4.2.30 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Parp10 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_variant: C41 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pnic-Bsa4
symmetry	Space Group: P 1 21 1	R_factor 0.208 R_Free 0.213
crystal cell	length a length b length c angle alpha angle beta angle gamma 52.480 88.677 58.405 90.00 104.68 90.00
method	X-Ray Diffraction	resolution	1.25 Å
ligand	78P	enzyme	Transferase E.C.2.4.2.30 BRENDA
Gene Ontology	Chain Function Process Component A, B
Primary reference	Structural Basis for Potency and Promiscuity in Poly(ADP-ribose) Polymerase (PARP) and Tankyrase Inhibitors., Thorsell AG, Ekblad T, Karlberg T, Low M, Pinto AF, Tresaugues L, Moche M, Cohen MS, Schuler H, J Med Chem. 2016 Dec 21. PMID:28001384

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (134 Kb) [Save to disk] Biological Unit Coordinates (5lx6.pdb1.gz) 68 Kb Biological Unit Coordinates (5lx6.pdb2.gz) 64 Kb LPC: Ligand-Protein Contacts for 5LX6 CSU: Contacts of Structural Units for 5LX6 Structure Factors (1260 Kb) Retrieve 5LX6 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5LX6 from S2C, [Save to disk] Re-refined 5lx6 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5LX6 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5LX6

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5lx6_B] [5lx6] [5lx6_A] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 5LX6

Community annotation for 5LX6 at PDBWiki (http://pdbwiki.org)

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---