5M9N	Structural Protein	date	Nov 01, 2016
title	Crystal Structure Of Human Tdrd1 Extended Tudor Domain In Co A Symmetrically Dimethylated E2f Peptide
authors	C.Tallant, P.Savitsky, J.Moehlenbrink, C.Chan, G.Nunez-Alonso, J. F.Von Delft, C.H.Arrowsmith, A.M.Edwards, C.Bountra, O.Fedorov, Thangue, S.Knapp, Structural Genomics Consortium (Sgc)
compound		source
Molecule: Tudor Domain-Containing Protein 1 Chain: A, B Synonym: Cancertestis Antigen 41.1,Ct41.1 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Tdrd1 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_vector_type: Plasmid
Molecule: E2f Peptide Chain: C Engineered: Yes Other_details: 2mr: Dimethylated Arginine		Synthetic: Yes Organism_scientific: Homo Sapiens Organism_taxid: 9606
symmetry	Space Group: P 1	R_factor 0.212 R_Free 0.260
crystal cell	length a length b length c angle alpha angle beta angle gamma 42.910 52.962 59.619 64.94 88.85 67.67
method	X-Ray Diffraction	resolution	1.95 Å
ligand	2MR, EDO	enzyme

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (136 Kb) [Save to disk] Biological Unit Coordinates (5m9n.pdb1.gz) 67 Kb Biological Unit Coordinates (5m9n.pdb2.gz) 65 Kb LPC: Ligand-Protein Contacts for 5M9N CSU: Contacts of Structural Units for 5M9N Structure Factors (688 Kb) Retrieve 5M9N in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5M9N from S2C, [Save to disk] Re-refined 5m9n structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5M9N in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5M9N

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5m9n_A] [5m9n] [5m9n_B] [5m9n_C] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 5M9N: [TUDOR ] by SMART

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