5MLO Hydrolase date Dec 07, 2016
title Crystal Structure Of Human Pcna In Complex With Zranb3 Pip B
authors A.Ariza
compound source
Molecule: Proliferating Cell Nuclear Antigen
Chain: A, C, E
Synonym: Pcna,Cyclin
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Pcna
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Zranb3 Pip Box Peptide
Chain: B, D, F
Engineered: Yes
Synthetic: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
symmetry Space Group: P 21 21 21
R_factor 0.211 R_Free 0.259
crystal
cell
length a length b length c angle alpha angle beta angle gamma
68.136 86.802 156.679 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.96 Å
ligand NA enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, C, E


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (263 Kb) [Save to disk]
  • Biological Unit Coordinates (5mlo.pdb1.gz) 251 Kb
  • Biological Unit Coordinates (5mlo.pdb2.gz) 4 Kb
  • Biological Unit Coordinates (5mlo.pdb3.gz) 4 Kb
  • Biological Unit Coordinates (5mlo.pdb4.gz) 4 Kb
  • LPC: Ligand-Protein Contacts for 5MLO
  • CSU: Contacts of Structural Units for 5MLO
  • Structure Factors (2797 Kb)
  • Retrieve 5MLO in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5MLO from S2C, [Save to disk]
  • Re-refined 5mlo structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5MLO in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5MLO
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5mlo_E] [5mlo_F] [5mlo_A] [5mlo_C] [5mlo_B] [5mlo_D]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 5MLO
  • Community annotation for 5MLO at PDBWiki (http://pdbwiki.org)

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