5MOM Dna Binding Protein date Dec 14, 2016
title Crystal Structure Of Pcna Encoding The Hypomorphic Mutation
authors A.J.Biasutto, E.J.Mancini, C.M.Green, R.H.C.Wilson
compound source
Molecule: Proliferating Cell Nuclear Antigen
Chain: A, B, C
Synonym: Pcna,Cyclin
Engineered: Yes
Mutation: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Pcna
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_variant: Star
Expression_system_vector_type: Plasmid
symmetry Space Group: P 41 21 2
R_factor 0.199 R_Free 0.216
crystal
cell
length a length b length c angle alpha angle beta angle gamma
162.950 162.950 140.400 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.27 Å
Gene
Ontology
ChainFunctionProcessComponent
A, C, B


Primary referencePCNA dependent cellular activities tolerate dramatic perturbations in PCNA client interactions., Wilson RH, Biasutto AJ, Wang L, Fischer R, Baple EL, Crosby AH, Mancini EJ, Green CM, DNA Repair (Amst). 2017 Feb;50:22-35. doi: 10.1016/j.dnarep.2016.12.003. Epub, 2016 Dec 31. PMID:28073635
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (238 Kb) [Save to disk]
  • Biological Unit Coordinates (5mom.pdb1.gz) 232 Kb
  • CSU: Contacts of Structural Units for 5MOM
  • Structure Factors (3454 Kb)
  • Retrieve 5MOM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5MOM from S2C, [Save to disk]
    • View 5MOM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5MOM
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5mom_B] [5mom_A] [5mom_C] [5mom]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 5MOM
  • Community annotation for 5MOM at PDBWiki (http://pdbwiki.org)

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