5MY4	Immune System	date	Jan 25, 2017
title	Structure Of Pyroglutamate-Abeta-Specific Fab C#17 In Comple Human Abeta-Pe3-12pegb
authors	C.Parthier, A.Piechotta, M.T.Stubbs
compound		source
Molecule: Fab C#17 Light Chain Chain: A Engineered: Yes		Organism_scientific: Mus Musculus Organism_taxid: 10090 Expression_system: Mus Musculus Expression_system_taxid: 10090
Molecule: Fab C#17 Heavy Chain Chain: B Engineered: Yes		Organism_scientific: Mus Musculus Organism_taxid: 10090 Expression_system: Mus Musculus Expression_system_taxid: 10090
Molecule: Pyroglutamate-Abeta Pe3-12-Pegb Chain: C Engineered: Yes		Synthetic: Yes Organism_scientific: Homo Sapiens Organism_taxid: 9606
symmetry	Space Group: P 1 21 1	R_factor 0.186 R_Free 0.250
crystal cell	length a length b length c angle alpha angle beta angle gamma 43.170 87.142 58.029 90.00 96.06 90.00
method	X-Ray Diffraction	resolution	2.21 Å
ligand	PCA	enzyme
Primary reference	Structural and functional analyses of pyroglutamate-amyloid-beta-specific antibodies as a basis for Alzheimer immunotherapy., Piechotta A, Parthier C, Kleinschmidt M, Gnoth K, Pillot T, Lues I, Demuth HU, Schilling S, Rahfeld JU, Stubbs MT, J Biol Chem. 2017 Jul 28;292(30):12713-12724. doi: 10.1074/jbc.M117.777839. Epub , 2017 Jun 16. PMID:28623233

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (76 Kb) [Save to disk] Biological Unit Coordinates (5my4.pdb1.gz) 71 Kb LPC: Ligand-Protein Contacts for 5MY4 CSU: Contacts of Structural Units for 5MY4 Structure Factors (287 Kb) Retrieve 5MY4 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5MY4 from S2C, [Save to disk] Re-refined 5my4 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

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Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5my4_C] [5my4_A] [5my4_B] SWISS-PROT database: Domain organization of by SWISSPFAM

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