5N4W	Ligase	date	Feb 11, 2017
title	Crystal Structure Of The Cul2-Rbx1-Elobc-Vhl Ubiquitin Ligas
authors	T.A.F.Cardote, M.S.Gadd, A.Ciulli
compound		source
Molecule: Cullin-2 Chain: A Synonym: Cul-2 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Cul2 Expression_system: Spodoptera Frugiperda Expression_system_common: Fall Armyworm Expression_system_taxid: 7108 Expression_system_cell_line: Sf21 Expression_system_vector_type: Baculovirus
Molecule: Von Hippel-Lindau Disease Tumor Suppressor Chain: V Synonym: Protein G7,Pvhl Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Vhl Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: E3 Ubiquitin-Protein Ligase Rbx1 Chain: R Synonym: Protein Zyp,Ring Finger Protein 75,Ring-Box Protei Regulator Of Cullins 1; Ec: 6.3.2.- Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Rbx1, Rnf75, Roc1 Expression_system: Spodoptera Frugiperda Expression_system_common: Fall Armyworm Expression_system_taxid: 7108 Expression_system_cell_line: Sf21
Molecule: Elongin-B Chain: B Synonym: Elob,Elongin 18 Kda Subunit,Rna Polymerase II Tran Factor Siii Subunit B,Siii P18,Transcription Elongation Fac Polypeptide 2; Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Elob, Tceb2 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Elongin-C Chain: C Synonym: Eloc,Elongin 15 Kda Subunit,Rna Polymerase II Tran Factor Siii Subunit C,Siii P15,Transcription Elongation Fac Polypeptide 1; Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Eloc, Tceb1 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: C 2 2 21	R_factor 0.302 R_Free 0.346
crystal cell	length a length b length c angle alpha angle beta angle gamma 86.038 190.962 238.885 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	3.90 Å
ligand	ZN	enzyme	Ligase E.C.6.3.2 BRENDA
Gene Ontology	Chain Function Process Component A B C R
Primary reference	Crystal Structure of the Cul2-Rbx1-EloBC-VHL Ubiquitin Ligase Complex., Cardote TAF, Gadd MS, Ciulli A, Structure. 2017 Jun 6;25(6):901-911.e3. doi: 10.1016/j.str.2017.04.009. PMID:28591624

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (348 Kb) [Save to disk] Biological Unit Coordinates (5n4w.pdb1.gz) 338 Kb LPC: Ligand-Protein Contacts for 5N4W CSU: Contacts of Structural Units for 5N4W Structure Factors (469 Kb) Retrieve 5N4W in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5N4W from S2C, [Save to disk] Re-refined 5n4w structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

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Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5n4w_C] [5n4w_V] [5n4w_A] [5n4w_R] [5n4w_B] SWISS-PROT database: Domain organization of by SWISSPFAM

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