5N7V Transferase date Feb 21, 2017
title Ttk Kinase Domain In Complex With Mpi-0479605
authors J.Uitdehaag, N.Willemsen-Seegers, G.J.R.Zaman
compound source
Molecule: Dual Specificity Protein Kinase Ttk
Chain: A
Synonym: Phosphotyrosine Picked Threonine-Protein Kinase,Py
Ec: 2.7.12.1
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ttk, Mps1, Mps1l1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: I 2 2 2
R_factor 0.194 R_Free 0.278
crystal
cell
length a length b length c angle alpha angle beta angle gamma
71.030 112.010 114.043 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.52 Å
ligand 7PE, 8PT, TPO enzyme Transferase E.C.2.7.12.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (52 Kb) [Save to disk]
  • Biological Unit Coordinates (5n7v.pdb1.gz) 47 Kb
  • LPC: Ligand-Protein Contacts for 5N7V
  • CSU: Contacts of Structural Units for 5N7V
  • Structure Factors (438 Kb)
  • Retrieve 5N7V in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5N7V from S2C, [Save to disk]
  • Re-refined 5n7v structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5N7V in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5N7V
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5n7v_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 5N7V
  • Community annotation for 5N7V at PDBWiki (http://pdbwiki.org)

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