5N84 Transferase date Feb 22, 2017
title Ttk Kinase Domain In Complex With Mps-Bay2b
authors J.Uitdehaag, N.Willemsen-Seegers, J.De Man, R.C.Buijsman, G.J.R.
compound source
Molecule: Dual Specificity Protein Kinase Ttk
Chain: A
Fragment: Unp Residues 519-808
Synonym: Phosphotyrosine Picked Threonine-Protein Kinase,Py
Ec: 2.7.12.1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ttk, Mps1, Mps1l1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: I 2 2 2
R_factor 0.205 R_Free 0.261
crystal
cell
length a length b length c angle alpha angle beta angle gamma
71.178 112.199 115.983 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.30 Å
ligand 8Q5, NA, PG0 enzyme Transferase E.C.2.7.12.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (51 Kb) [Save to disk]
  • Biological Unit Coordinates (5n84.pdb1.gz) 45 Kb
  • LPC: Ligand-Protein Contacts for 5N84
  • CSU: Contacts of Structural Units for 5N84
  • Structure Factors (593 Kb)
  • Retrieve 5N84 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5N84 from S2C, [Save to disk]
  • Re-refined 5n84 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5N84 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5N84
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5n84_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5N84
  • Community annotation for 5N84 at PDBWiki (http://pdbwiki.org)

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