5NHQ Viral Protein date Mar 22, 2017
title Nuclear Magnetic Resonance Structure Of The Human Polyoma Jc Agnoprotein
authors P.Coric, A.S.Saribas, M.Abou-Gharbia, W.Childers, J.Condra, M.K.W M.Safak, S.Bouaziz
compound source
Molecule: Agnoprotein
Chain: A
Synonym: Agno
Engineered: Yes
Other_details: Chemically Synthetized Full Protein
Synthetic: Yes
Organism_scientific: Jc Polyomavirus
Organism_common: Jcpyv
Organism_taxid: 10632
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A
  • ion channel activity


  • Primary referenceNuclear Magnetic Resonance Structure of the Human Polyoma JC Virus Agnoprotein., Coric P, Saribas AS, Abou-Gharbia M, Childers W, Condra J, White MK, Safak M, Bouaziz S, J Cell Biochem. 2017 Mar 10. doi: 10.1002/jcb.25977. PMID:28295503
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (234 Kb) [Save to disk]
  • Biological Unit Coordinates (5nhq.pdb1.gz) 20 Kb
  • CSU: Contacts of Structural Units for 5NHQ
  • Original NMR restraints for 5NHQ from PDB
  • Retrieve 5NHQ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5NHQ from S2C, [Save to disk]
  • View 5NHQ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5NHQ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5nhq_A] [5nhq]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5NHQ
  • Community annotation for 5NHQ at PDBWiki (http://pdbwiki.org)

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