5O8O Protein Transport date Jun 13, 2017
title N. Crassa Tom40 Model Based On Cryo-Em Structure Of The Tom Complex At 6.8 A
authors T.Bausewein, D.J.Mills, S.Nussberger, B.Nitschke, W.Kuehlbrandt
compound source
Molecule: Mitochondrial Import Receptor Subunit Tom40
Chain: A
Synonym: Protein Mom38,Translocase Of Outer Membrane 40 Kda
Organism_scientific: Neurospora Crassa (Strain Atcc 24698 1a Cbs 708.71 Dsm 1257 Fgsc 987);
Organism_taxid: 5141
Strain: Atcc 24698 74-Or23-1a Cbs 708.71 Dsm 1257 F
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 6.80 Å
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCryo-EM Structure of the TOM Core Complex from Neurospora crassa., Bausewein T, Mills DJ, Langer JD, Nitschke B, Nussberger S, Kuhlbrandt W, Cell. 2017 Aug 10;170(4):693-700.e7. doi: 10.1016/j.cell.2017.07.012. PMID:28802041
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (89 Kb) [Save to disk]
  • Biological Unit Coordinates (5o8o.pdb1.gz) 86 Kb
  • CSU: Contacts of Structural Units for 5O8O
  • Retrieve 5O8O in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5O8O from S2C, [Save to disk]
  • View 5O8O in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5O8O
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5o8o_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5O8O
  • Community annotation for 5O8O at PDBWiki (http://pdbwiki.org)

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