5RHN Nucleotide-Binding Protein date Feb 26, 1997
title Histidine Triad Nucleotide-Binding Protein (Hint) From Rabbi Complexed With 8-Br-Amp
authors C.Brenner, P.Garrison, J.Gilmour, D.Peisach, D.Ringe, G.A.Petsko, J.M.Lowenstein
compound source
Molecule: Histidine Triad Nucleotide-Binding Protein
Chain: A
Synonym: Hint
Engineered: Yes
Organism_scientific: Oryctolagus Cuniculus
Organism_common: Rabbit
Organism_taxid: 9986
Organ: Heart
Gene: Hint
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Jm109de3laciq
Expression_system_vector_type: Lac
Expression_system_vector: Psga02
Expression_system_plasmid: Psga02-Hint
Expression_system_gene: Hint
Other_details: Rabbit Hint Cdna Was Cloned From Heart Libra Expressed In Escherichia Coli, And Purified By Adenosine-Ag Affinity Chromatography
symmetry Space Group: P 43 21 2
R_factor 0.162 R_Free 0.264
crystal
cell
length a length b length c angle alpha angle beta angle gamma
40.320 40.320 143.080 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.31 Å
ligand 8BR enzyme
related structures by homologous chain: 1KPC
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCrystal structures of HINT demonstrate that histidine triad proteins are GalT-related nucleotide-binding proteins., Brenner C, Garrison P, Gilmour J, Peisach D, Ringe D, Petsko GA, Lowenstein JM, Nat Struct Biol 1997 Mar;4(3):231-8. PMID:9164465
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (24 Kb) [Save to disk]
  • Biological Unit Coordinates (5rhn.pdb1.gz) 38 Kb
  • LPC: Ligand-Protein Contacts for 5RHN
  • CSU: Contacts of Structural Units for 5RHN
  • Likely Quarternary Molecular Structure file(s) for 5RHN
  • Structure Factors (31 Kb)
  • Retrieve 5RHN in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5RHN from S2C, [Save to disk]
  • Re-refined 5rhn structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5RHN in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5RHN
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 5RHN, from MSDmotif at EBI
  • Genome occurence of 5RHN's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d5rhn__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5rhn] [5rhn_A]
  • SWISS-PROT database: [P80912]
  • Domain organization of [HINT1_RABIT] by SWISSPFAM
  • Other resources with information on 5RHN
  • Community annotation for 5RHN at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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