5SVX Transcription date Aug 08, 2016
title Morc3 Cw In Complex With Histone H3k4me3
authors Q.Tong, F.H.Andrews, T.G.Kutateladze
compound source
Molecule: Morc Family Cw-Type Zinc Finger Protein 3
Chain: A
Fragment: Unp Residues 407-454
Synonym: Nuclear Matrix Protein 2,Zinc Finger Cw-Type Coile Domain Protein 3;
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Morc3, Kiaa0136, Nxp2, Zcwcc3
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: H3k4me3
Chain: B
Engineered: Yes
Synthetic: Yes
Organism_scientific: Homo Sapiens
Organism_taxid: 9606
symmetry Space Group: P 21 21 2
R_factor 0.143 R_Free 0.178
crystal
cell
length a length b length c angle alpha angle beta angle gamma
31.250 68.550 26.530 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.56 Å
ligand M3L, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (17 Kb) [Save to disk]
  • Biological Unit Coordinates (5svx.pdb1.gz) 13 Kb
  • LPC: Ligand-Protein Contacts for 5SVX
  • CSU: Contacts of Structural Units for 5SVX
  • Structure Factors (125 Kb)
  • Retrieve 5SVX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5SVX from S2C, [Save to disk]
  • Re-refined 5svx structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5SVX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5SVX
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5svx] [5svx_B] [5svx_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 5SVX
  • Community annotation for 5SVX at PDBWiki (http://pdbwiki.org)

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