5T0O Membrane Protein date Aug 16, 2016
title Crystal Structure Of A Membrane Protein
authors C.C.Su, E.W.Yu
compound source
Molecule: Cmeb
Chain: A, B, C
Engineered: Yes
Mutation: Yes
 Organism_scientific: Campylobacter Jejuni
Organism_taxid: 197
Gene: Cmeb
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet15b
symmetry Space Group: C 1 2 1
R_factor 0.211 R_Free 0.268
crystal
cell
length a length b length c angle alpha angle beta angle gamma
300.710 147.538 120.027 90.00 99.87 90.00
method X-Ray Diffractionresolution 3.15 Å
Gene
Ontology
ChainFunctionProcessComponent
A, C, B


Primary referenceStructures and transport dynamics of a Campylobacter jejuni multidrug efflux pump., Su CC, Yin L, Kumar N, Dai L, Radhakrishnan A, Bolla JR, Lei HT, Chou TH, Delmar JA, Rajashankar KR, Zhang Q, Shin YK, Yu EW, Nat Commun. 2017 Aug 1;8(1):171. doi: 10.1038/s41467-017-00217-z. PMID:28761097
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (476 Kb) [Save to disk]
  • Biological Unit Coordinates (5t0o.pdb1.gz) 471 Kb
  • CSU: Contacts of Structural Units for 5T0O
  • Structure Factors (1386 Kb)
  • Retrieve 5T0O in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5T0O from S2C, [Save to disk]
    • View 5T0O in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5T0O
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5t0o_B] [5t0o_C] [5t0o_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 5T0O
  • Community annotation for 5T0O at PDBWiki (http://pdbwiki.org)

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science