5T0R	Metal Binding Protein	date	Aug 16, 2016
title	Synaptotagmin 1 C2a Domain, Cadmium-Bound
authors	A.B.Taylor, P.J.Hart, T.I.Igumenova
compound		source
Molecule: Synaptotagmin-1 Chain: A Fragment: C2a Domain Residues 140-265 Synonym: Synaptotagmin I,Syti,P65 Engineered: Yes		Organism_scientific: Mus Musculus Organism_common: Mouse Organism_taxid: 10090 Gene: Syt1 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet-Sumo
symmetry	Space Group: P 21 21 21	R_factor 0.186 R_Free 0.229
crystal cell	length a length b length c angle alpha angle beta angle gamma 28.064 63.276 76.143 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.95 Å
ligand	CD	enzyme
Gene Ontology	Chain Function Process Component A

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (28 Kb) [Save to disk] Biological Unit Coordinates (5t0r.pdb1.gz) 23 Kb LPC: Ligand-Protein Contacts for 5T0R CSU: Contacts of Structural Units for 5T0R Structure Factors (129 Kb) Retrieve 5T0R in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5T0R from S2C, [Save to disk] Re-refined 5t0r structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5T0R in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5T0R

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5t0r_A] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 5T0R

Community annotation for 5T0R at PDBWiki (http://pdbwiki.org)

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