5TCZ Toxin date Sep 16, 2016
title Nmr Solution Structure Of Engineered Protoxin-II Analog
authors A.C.Gibbs, A.D.Wickenden
compound source
Molecule: Betaomega-Theraphotoxin-Tp2a
Chain: A
Engineered: Yes
Synthetic: Yes
Organism_scientific: Thrixopelma Pruriens
Organism_common: Peruvian Green Velvet Tarantula
Organism_taxid: 213387
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A
  • toxin activity


  • Primary referenceInsensitivity to pain induced by a potent selective closed-state Nav1.7 inhibitor., Flinspach M, Xu Q, Piekarz AD, Fellows R, Hagan R, Gibbs A, Liu Y, Neff RA, Freedman J, Eckert WA, Zhou M, Bonesteel R, Pennington MW, Eddinger KA, Yaksh TL, Hunter M, Swanson RV, Wickenden AD, Sci Rep. 2017 Jan 3;7:39662. doi: 10.1038/srep39662. PMID:28045073
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (179 Kb) [Save to disk]
  • Biological Unit Coordinates (5tcz.pdb1.gz) 9 Kb
  • CSU: Contacts of Structural Units for 5TCZ
  • Original NMR restraints for 5TCZ from PDB
  • Retrieve 5TCZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5TCZ from S2C, [Save to disk]
  • View 5TCZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5TCZ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5tcz_A] [5tcz]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5TCZ
  • Community annotation for 5TCZ at PDBWiki (http://pdbwiki.org)

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