5TEG	Transferase	date	Sep 21, 2016
title	Crystal Structure Of Hsetd8 In Complex With Histone H4k20 No Mutant Peptide And S-Adenosylmethionine
authors	R.A.Judge, A.M.Petros
compound		source
Molecule: N-Lysine Methyltransferase Kmt5a Chain: A, B Fragment: Unp Residues 234-393 Synonym: H4-K20-Hmtase Kmt5a,Histone-Lysine N-Methyltransfe Kmt5a,Lysine N-Methyltransferase 5a,Lysine-Specific Methyla Prset Domain-Containing Protein 07,Prset07,Set Domain-Con Protein 8; Ec: 2.1.1.-,2.1.1.43 Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Kmt5a, Prset7, Set07, Set8, Setd8 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21(De3)-T1r
Molecule: Histone H4 Mutant Peptide With H4k20norleucine Chain: D, E Fragment: Unp Residues 16-23 Engineered: Yes Mutation: Yes		Synthetic: Yes Organism_scientific: Homo Sapiens Organism_taxid: 9606
symmetry	Space Group: P 1	R_factor 0.189 R_Free 0.210
crystal cell	length a length b length c angle alpha angle beta angle gamma 44.310 45.059 52.649 114.73 90.77 90.81
method	X-Ray Diffraction	resolution	1.30 Å
ligand	NLE, SAM	enzyme	Transferase E.C.2.1.1 BRENDA
Gene Ontology	Chain Function Process Component A, B
Primary reference	Turning a Substrate Peptide into a Potent Inhibitor for the Histone Methyltransferase SETD8., Judge RA, Zhu H, Upadhyay AK, Bodelle PM, Hutchins CW, Torrent M, Marin VL, Yu W, Vedadi M, Li F, Brown PJ, Pappano WN, Sun C, Petros AM, ACS Med Chem Lett. 2016 Oct 11;7(12):1102-1106. doi:, 10.1021/acsmedchemlett.6b00303. eCollection 2016 Dec 8. PMID:27994746

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (66 Kb) [Save to disk] Biological Unit Coordinates (5teg.pdb1.gz) 32 Kb Biological Unit Coordinates (5teg.pdb2.gz) 31 Kb LPC: Ligand-Protein Contacts for 5TEG CSU: Contacts of Structural Units for 5TEG Structure Factors (2359 Kb) Retrieve 5TEG in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5TEG from S2C, [Save to disk] Re-refined 5teg structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

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Visual 3D analysis of 5TEG

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Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5teg_D] [5teg_A] [5teg_B] [5teg] [5teg_E] SWISS-PROT database: Domain organization of by SWISSPFAM

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