5TGZ Signaling Protein date Sep 28, 2016
title Crystal Structure Of The Human Cannabinoid Receptor Cb1
authors T.Hua, K.Vemuri, M.Pu, L.Qu, G.W.Han, Y.Wu, S.Zhao, W.Shui, S.Li, A.K R.B.Laprairie, E.L.Stahl, J.H.Ho, N.Zvonok, H.Zhou, I.Kufareva, B Q.Zhao, M.A.Hanson, L.M.Bohn, A.Makriyannis, R.C.Stevens, Z.J.Li
compound source
Molecule: Cannabinoid Receptor 1,Flavodoxin,Cannabinoid Rec
Chain: A
Fragment: Unp Residues 99-306,Unp Residues 2-148,Unp Residu 414;
Synonym: Cb1,Cann6,Cb1,Cann6
Engineered: Yes
Mutation: Yes
Other_details: The Fusion Protein Of Cannabinoid Receptor 1 99-306), Flavodoxin (Residues 1002-1148), And Cannabinoid R (Residues 332-414)
Organism_scientific: Homo Sapiens, Desulfovibrio Vulgaris
Organism_common: Human
Organism_taxid: 9606, 882
Strain: Hildenborough Atcc 29579 Ncimb 8303
Gene: Cnr1, Cnr, Dvu_2680
Expression_system: Homo Sapiens
Expression_system_taxid: 9606
Expression_system_cell_line: Freestyle 293-F (Hek-293f)
Expression_system_cell: Hek293f
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Ptt5
symmetry Space Group: C 1 2 1
R_factor 0.207 R_Free 0.238
crystal
cell
length a length b length c angle alpha angle beta angle gamma
116.560 52.630 143.630 90.00 111.14 90.00
method X-Ray Diffractionresolution 2.80 Å
ligand FMN, OLA, OLC, PEG, ZDG enzyme
Gene
Ontology
ChainFunctionProcessComponent
A
  • electron transfer activity


  • Primary referenceCrystal Structure of the Human Cannabinoid Receptor CB1., Hua T, Vemuri K, Pu M, Qu L, Han GW, Wu Y, Zhao S, Shui W, Li S, Korde A, Laprairie RB, Stahl EL, Ho JH, Zvonok N, Zhou H, Kufareva I, Wu B, Zhao Q, Hanson MA, Bohn LM, Makriyannis A, Stevens RC, Liu ZJ, Cell. 2016 Oct 20;167(3):750-762.e14. doi: 10.1016/j.cell.2016.10.004. PMID:27768894
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (154 Kb) [Save to disk]
  • Biological Unit Coordinates (5tgz.pdb1.gz) 148 Kb
  • LPC: Ligand-Protein Contacts for 5TGZ
  • CSU: Contacts of Structural Units for 5TGZ
  • Structure Factors (511 Kb)
  • Retrieve 5TGZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5TGZ from S2C, [Save to disk]
  • Re-refined 5tgz structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5TGZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5TGZ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5tgz_A] [5tgz]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5TGZ
  • Community annotation for 5TGZ at PDBWiki (http://pdbwiki.org)

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