5TNT	Hydrolase Hydrolase Inhibitor	date	Oct 14, 2016
title	Discovery Of Novel Aminobenzisoxazole Derivatives As Orally Factor Ixa Inhibitors
authors	I.Sakurada, T.Endo, K.Hikita, T.Hirabayashi, Y.Hosaka, Y.Kato, Y.M S.Matsumoto, T.Mizuno, A.Nagasue, T.Nishimura, S.Shimada, M.Shin K.Taguchi, K.Takeuchi, T.Yokoyama, A.Hruza, P.Reichert, T.Zhang, K.Nakao, S.Furusako
compound		source
Molecule: Coagulation Factor Ix Chain: A Fragment: Unp Residues 227-461 Synonym: Christmas Factor,Plasma Thromboplastin Component,P Ec: 3.4.21.22 Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: F9 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Coagulation Factor Ix Chain: B Fragment: Unp Residues 131-191 Synonym: Christmas Factor,Plasma Thromboplastin Component,P Ec: 3.4.21.22 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: F9 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: H 3	R_factor 0.146 R_Free 0.161
crystal cell	length a length b length c angle alpha angle beta angle gamma 99.084 99.084 94.680 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	1.40 Å
ligand	7GQ, NA, NHE	enzyme	Hydrolase E.C.3.4.21.22 BRENDA
Gene Ontology	Chain Function Process Component A B
Primary reference	Discovery of novel aminobenzisoxazole derivatives as orally available factor IXa inhibitors., Sakurada I, Endo T, Hikita K, Hirabayashi T, Hosaka Y, Kato Y, Maeda Y, Matsumoto S, Mizuno T, Nagasue H, Nishimura T, Shimada S, Shinozaki M, Taguchi K, Takeuchi K, Yokoyama T, Hruza A, Reichert P, Zhang T, Wood HB, Nakao K, Furusako S, Bioorg Med Chem Lett. 2017 Mar 6. pii: S0960-894X(17)30225-1. doi:, 10.1016/j.bmcl.2017.03.002. PMID:28408226

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (206 Kb) [Save to disk] Biological Unit Coordinates (5tnt.pdb1.gz) 200 Kb LPC: Ligand-Protein Contacts for 5TNT CSU: Contacts of Structural Units for 5TNT Structure Factors (2362 Kb) Retrieve 5TNT in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5TNT from S2C, [Save to disk] Re-refined 5tnt structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

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Visual 3D analysis of 5TNT

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Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5tnt] [5tnt_B] [5tnt_A] SWISS-PROT database: Domain organization of by SWISSPFAM

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