5UA7 Antimicrobial Protein date Dec 19, 2016
title Ocellatin-Lb2, Solution Structure In Sds Micelle By Nmr Spec
authors K.A.G.Gusmao, D.M.Dos Santos, V.M.Santos, D.Pilo-Veloso, M.E.De J.M.Resende
compound source
Molecule: Ocellatin-Lb2
Chain: A
Engineered: Yes
Synthetic: Yes
Organism_scientific: Leptodactylus Labyrinthicus
Organism_common: Frogs And Toads
Organism_taxid: 326590
methodSolution NMR
ligand NH2 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceNMR structures in different membrane environments of three ocellatin peptides isolated from Leptodactylus labyrinthicus., Gomes KAGG, Dos Santos DM, Santos VM, Pilo-Veloso D, Mundim HM, Rodrigues LV, Liao LM, Verly RM, de Lima ME, Resende JM, Peptides. 2018 Mar 26;103:72-83. doi: 10.1016/j.peptides.2018.03.016. PMID:29596881
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (49 Kb) [Save to disk]
  • Biological Unit Coordinates (5ua7.pdb1.gz) 6 Kb
  • LPC: Ligand-Protein Contacts for 5UA7
  • CSU: Contacts of Structural Units for 5UA7
  • Original NMR restraints for 5UA7 from PDB
  • Retrieve 5UA7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5UA7 from S2C, [Save to disk]
  • View 5UA7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5UA7
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5ua7] [5ua7_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5UA7
  • Community annotation for 5UA7 at PDBWiki (http://pdbwiki.org)

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