5UDY	Hydrolase	date	Dec 28, 2016
title	Human Alkaline Sphingomyelinase (Alk-Smase, Enpp7, Npp7)
authors	A.Gorelik, F.Liu, K.Illes, B.Nagar
compound		source
Molecule: Ectonucleotide Pyrophosphatasephosphodiesterase Member 7; Chain: A Fragment: Unp Residues 22-433 Synonym: Npp-7,Alkaline Sphingomyelin Phosphodiesterase,Int Alkaline Sphingomyelinase,Alk-Smase; Ec: 3.1.4.12 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Enpp7, Unq3077pro9912 Expression_system: Spodoptera Frugiperda Expression_system_common: Fall Armyworm Expression_system_taxid: 7108 Expression_system_vector_type: Baculovirus
symmetry	Space Group: P 31 2 1	R_factor 0.179 R_Free 0.207
crystal cell	length a length b length c angle alpha angle beta angle gamma 103.246 103.246 113.554 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.60 Å
ligand	FUC, IOD, NA, NAG, ZN	enzyme	Hydrolase E.C.3.1.4.12 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Crystal Structure of the Human Alkaline Sphingomyelinase Provides Insights into Substrate Recognition., Gorelik A, Liu F, Illes K, Nagar B, J Biol Chem. 2017 Mar 14. pii: jbc.M116.769273. doi: 10.1074/jbc.M116.769273. PMID:28292932

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (203 Kb) [Save to disk] Biological Unit Coordinates (5udy.pdb1.gz) 196 Kb LPC: Ligand-Protein Contacts for 5UDY CSU: Contacts of Structural Units for 5UDY Structure Factors (222 Kb) Retrieve 5UDY in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5UDY from S2C, [Save to disk] Re-refined 5udy structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

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Visual 3D analysis of 5UDY

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Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5udy_A] [5udy] SWISS-PROT database: Domain organization of by SWISSPFAM

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